The detailed information of tRNA gene sequence


Sequence ID>WENV170687238
Genome IDLFRM01184521
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13678
End posion on genome 13603
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gcactgatat
tRNA gene sequence 
GCACCCTTAGCTCAGTTGGTAGAGCAATTGACTCTTAATCAATGGGTCTGGGGTTCGAGT
CCCCAAGGGTGTACCA
Downstream region at tRNA end position 
ttttagaatc
Secondary structure (Cloverleaf model)
>WENV170687238	Lys	CTT
                   t      ACCA ttttagaatc
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     A C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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