The detailed information of tRNA gene sequence


Sequence ID>WENV170687239
Genome IDLFRM01184521
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 243
End posion on genome 169
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttaaatacag
tRNA gene sequence 
GCGCCTATAGTAAAATGGATATTATGAGGGACTCCGAAGCCCTAGTTGCAGGTTCGATTC
CTGCTAGGCGCGCCA
Downstream region at tRNA end position 
tttttttcca
Secondary structure (Cloverleaf model)
>WENV170687239	Arg	CCG
                   g      GCCA tttttttcca
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T T
                    T     C G T C C     A
      T A A        A      | | | | |     G
    G       A A T G       G C A G G     C
    G       | | | +                 T T
    A       T T A T
      T A          G     AGTT
                    A - T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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