The detailed information of tRNA gene sequence


Sequence ID>WENV170687265
Genome IDLFRM01186127
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1914
End posion on genome 1827
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgttgtcc
tRNA gene sequence 
GGAGAGCTGTCCGAGTGGTCTATGGTGACTGACTTGAAATCAGTTGGGTGTCACAGCCCC
AGGGGTTCGAATCCTCTGCTCTCCGCCA
Downstream region at tRNA end position 
ggctttattc
Secondary structure (Cloverleaf model)
>WENV170687265	Ser	TGA
                   c      GCCA ggctttattc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     T C T C C     A
      T G A        G      | | + | |     G
    G       G C C T       A G G G G     C
    G       + | |                   T T
    T       T G G T
      C T A        G     TGGGTGTCACAGCCCC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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