The detailed information of tRNA gene sequence


Sequence ID>WENV170687266
Genome IDLFRM01186133
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 138
End posion on genome 64
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gagttgtcag
tRNA gene sequence 
GCCCCCTTCGTCTAACGGTTAGGACACCAGACTTTCAATCTGACAACGAGAGTTCGACTC
TCTCAGGGGGTACGA
Downstream region at tRNA end position 
cctaaaaccc
Secondary structure (Cloverleaf model)
>WENV170687266	Glu	TTC
                   g      ACGA cctaaaaccc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     C T C T C     A
      C A A        C      | | | | |     G
    G       T C T G       G A G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    C   A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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