The detailed information of tRNA gene sequence


Sequence ID>WENV170687284
Genome IDLFRM01186842
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 837
End posion on genome 912
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aaaattgatt
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGGAGAGCGCTTGAATCGCACTCAAGAGGTCGGGGGTTCGAGT
CCCCTTGTCTCCACCA
Downstream region at tRNA end position 
tatnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170687284	Ala	CGC
                   t      ACCA tatnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     C - G
                     A - T          T G
                    T     T C C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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