The detailed information of tRNA gene sequence


Sequence ID>WENV170687327
Genome IDLFRM01188770
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 15750
End posion on genome 15822
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ggaataatat
tRNA gene sequence 
GCGGATTTAGCTCATCTGGTAGAGCGCGACCTTGCCAAGGTCGAGGTAGCGGGTTCGAGC
CCCGTAATCCGCTtaa
Downstream region at tRNA end position 
atagcgcgca
Secondary structure (Cloverleaf model)
>WENV170687327	Gly	GCC
                   t      Ttaa atagcgcgca
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     T - A          C G
                    T     T G C C C     A
      C T A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    C - G
                    G - C
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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