The detailed information of tRNA gene sequence


Sequence ID>WENV170687331
Genome IDLFRM01189148
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 14639
End posion on genome 14725
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ggttgtgcca
tRNA gene sequence 
GCCGGGCTGGCGGAATGGTAGACGCACGGGACTTAAAATCCCGGGGACGCAAGGTCCGTG
CGGGTTCAAGTCCCGCGCCCGGCACCA
Downstream region at tRNA end position 
tgtggtgcat
Secondary structure (Cloverleaf model)
>WENV170687331	Leu	TAA
                   a      ACCA tgtggtgcat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G C G G G     C
    G         | | |                 T T
    T       A C G C
      A G          A     GGGACGCAAGGTCCGT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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