The detailed information of tRNA gene sequence


Sequence ID>WENV170687335
Genome IDLFRM01189196
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 75
End posion on genome 1
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gcacaagcag
tRNA gene sequence 
GGGAATGTCGTATAGTGGCTAATACCTCAGCCTTCCAAGCTGAAGACGCGGGTTCGATTC
CCGTCATTCCCTCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170687335	Gly	TCC
                   g      TCCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
      T G A        C      + | | | |     G
    G       T A T G       G C G G G     C
    G       | | | |                 T T
    C       A T A C
      T A          C     AGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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