The detailed information of tRNA gene sequence


Sequence ID>WENV170687351
Genome IDLFRM01190113
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1494
End posion on genome 1569
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgcacttcat
tRNA gene sequence 
TCCTCGGTAGCTCAGCCGGTAGAGCAGGTGGCTGTTAACCACCCTGTCGGGGGTTCGAGT
CCCTCCCGAGGAGCCA
Downstream region at tRNA end position 
aatcaatatc
Secondary structure (Cloverleaf model)
>WENV170687351	Asn	GTT
                   t      GCCA aatcaatatc
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CTGTC
                    G - C
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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