The detailed information of tRNA gene sequence


Sequence ID>WENV170687397
Genome IDLFRM01191330
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 485
End posion on genome 410
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cattttttta
tRNA gene sequence 
GGCTCTGTAGCTCAGTCGGTAGAGCAAAGGACTGAAAATCCTTGTGTCGGCAGTTCAATT
CTGCCCGGAGCCACCA
Downstream region at tRNA end position 
ttaaaaaaat
Secondary structure (Cloverleaf model)
>WENV170687397	Phe	GAA
                   a      ACCA ttaaaaaaat
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     C C G T C     A
      T G A        A      | | | | |     A
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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