The detailed information of tRNA gene sequence


Sequence ID>WENV170687420
Genome IDLFRM01192231
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4089
End posion on genome 4014
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atattgactt
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGCAACGGTCTCCAAAACCGTAGGTTGCGGGTTCGAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
atctctctaa
Secondary structure (Cloverleaf model)
>WENV170687420	Trp	CCA
                   t      GCCA atctctctaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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