The detailed information of tRNA gene sequence


Sequence ID>WENV170687423
Genome IDLFRM01192231
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 270
End posion on genome 185
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tttataattt
tRNA gene sequence 
GGAGAGGTTCCCGAGTTGGCCAAAGGGGGCAGACTGTAAATCTGCTGGCGTAGCCTTCGC
TGGTTCGAATCCAGCCCTCTCCACCA
Downstream region at tRNA end position 
ctatattggg
Secondary structure (Cloverleaf model)
>WENV170687423	Tyr	GTA
                   t      ACCA ctatattggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
    T T G A        T      | | | | |     G
  G         G C C C       G C T G G     C
  G           | | |                 T T
  C         A G G G
    C A A          G     TGGCGTAGCCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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