The detailed information of tRNA gene sequence


Sequence ID>WENV170687438
Genome IDLFRM01192952
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 31417
End posion on genome 31493
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggacatttcT
tRNA gene sequence 
GGGCCTGTGGCTTAGCCAGGATATAGCGCCGGGCTTCTAACCCGGACGTCGAGGGTTCAA
ATCCCTCCAGGCCCGTat
Downstream region at tRNA end position 
tatcatccac
Secondary structure (Cloverleaf model)
>WENV170687438	Arg	TCT
                   T      GTat tatcatccac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | | | | |     A
  A         T T C G       G A G G G     C
  G           | | |                 T T
  G         T A G C
    A T A          G     ACGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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