The detailed information of tRNA gene sequence


Sequence ID>WENV170687489
Genome IDLFRM01195765
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 5929
End posion on genome 5853
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tagaaatgct
tRNA gene sequence 
GCCTCCATAGCTCAGTTGGTTAGAGCACATGACTGTTAATCATGGGGTCCTAGGTTCGAG
TCCTAGTGGGGGCGCCA
Downstream region at tRNA end position 
tttttatgtt
Secondary structure (Cloverleaf model)
>WENV170687489	Asn	GTT
                   t      GCCA tttttatgtt
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     A - T          T G
                    T     G A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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