The detailed information of tRNA gene sequence


Sequence ID>WENV170687521
Genome IDLFRM01196803
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 96468
End posion on genome 96544
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gagacgagga
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGAGGGTTCAAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
tttttaggcc
Secondary structure (Cloverleaf model)
>WENV170687521	Asp	GTC
                   a      GCCA tttttaggcc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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