The detailed information of tRNA gene sequence


Sequence ID>WENV170687524
Genome IDLFRM01196803
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 96759
End posion on genome 96833
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctccagatgt
tRNA gene sequence 
GGCGCCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATTCCCCAGTTCGAATC
TGGGTGGCGCCTCCA
Downstream region at tRNA end position 
ttttattttg
Secondary structure (Cloverleaf model)
>WENV170687524	Cys	GCA
                   t      TCCA ttttattttg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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