The detailed information of tRNA gene sequence


Sequence ID>WENV170687543
Genome IDLFRM01198556
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 717
End posion on genome 793
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaccaaaat
tRNA gene sequence 
GGCCTGGTAGTTCAGCTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGTCGGTTCGAG
TCCGATCCAGGTCGCCA
Downstream region at tRNA end position 
actctagtta
Secondary structure (Cloverleaf model)
>WENV170687543	Asp	GTC
                   t      GCCA actctagtta
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T A G C C     A
      C G A        A      + | | | |     G
    T       C T T G       G T C G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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