The detailed information of tRNA gene sequence


Sequence ID>WENV170687547
Genome IDLFRM01198556
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1104
End posion on genome 1177
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ccaaattttt
tRNA gene sequence 
GCGGATGTAGTTCAATGGTAGAACGTCAGCCTTCCAAGCTGAAAGCGTGAGTTCGATTCT
CATCATCCGCTCCA
Downstream region at tRNA end position 
tcaggggtcc
Secondary structure (Cloverleaf model)
>WENV170687547	Gly	TCC
                   t      TCCA tcaggggtcc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T A C T C     A
        A A        A      + | | | |     G
      T     C T T G       G T G A G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     AAGC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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