The detailed information of tRNA gene sequence


Sequence ID>WENV170687551
Genome IDLFRM01198556
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1456
End posion on genome 1544
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcgctcgag
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTCCGAAAGGGGC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cgaagacaac
Secondary structure (Cloverleaf model)
>WENV170687551	Ser	TGA
                   g      GCCA cgaagacaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACTCCGAAAGGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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