The detailed information of tRNA gene sequence


Sequence ID>WENV170687571
Genome IDLFRM01199722
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 621
End posion on genome 545
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
ttcacgccac
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGTGCCTGACTACGAATCAGTAGGTCGCATGTTCGAA
TCATGCCGGGCGCACCA
Downstream region at tRNA end position 
taaaaatcaa
Secondary structure (Cloverleaf model)
>WENV170687571	Arg	ACG
                   c      ACCA taaaaatcaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T A C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A T G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    C   T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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