The detailed information of tRNA gene sequence


Sequence ID>WENV170687576
Genome IDLFRM01199995
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 600
End posion on genome 526
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
attttacatg
tRNA gene sequence 
GTGGGTATAGCGTAGCTGGTTAGCGCGCCAGATTGTGGCTCTGGAGGTCAAGGGTTCGAA
TCCCTTTACCCACCCtt
Downstream region at tRNA end position 
tttaatgggc
Secondary structure (Cloverleaf model)
>WENV170687576	His	GTG
                   g      CCtt tttaatgggc
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       T G C G       A A G G G     C
    G       + | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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