The detailed information of tRNA gene sequence


Sequence ID>WENV170687603
Genome IDLFRM01200833
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6198
End posion on genome 6272
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cttcggccat
tRNA gene sequence 
TCCTCCATAGCTCAATGGCAGAGCATTCGACTGTTAATCGAAGGGTTGCTGGTTCGAGTC
CAGCTGGAGGAGCCG
Downstream region at tRNA end position 
cacgaggcgg
Secondary structure (Cloverleaf model)
>WENV170687603	Asn	GTT
                   t      GCCG cacgaggcgg
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T          T G
                    T     C G A C C     A
        A A        A      | | | | |     G
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     GGGTT
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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