The detailed information of tRNA gene sequence


Sequence ID>WENV170687654
Genome IDLFRM01204392
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 131283
End posion on genome 131357
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
aattgattct
tRNA gene sequence 
GCGGGTTTAACTCAGTGGTAGAGTGTCACCTTGCCAAGGTGAAAGTCGCGAGTTCGAATC
TCGTAACCCGCTCCA
Downstream region at tRNA end position 
nngcgggtgt
Secondary structure (Cloverleaf model)
>WENV170687654	Gly	GCC
                   t      TCCA nngcgggtgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     T G C T C     A
        G A        A      + | | | |     G
      T     C T C A       G C G A G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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