The detailed information of tRNA gene sequence


Sequence ID>WENV170687657
Genome IDLFRM01204531
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 203
End posion on genome 128
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccaagtaagc
tRNA gene sequence 
AGGCCAGTAGCTCGAACGGTAGAGCACCGGACTCCAAATCCGGGGGTTGGGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ctgatttgtt
Secondary structure (Cloverleaf model)
>WENV170687657	Trp	CCA
                   c      GCCA ctgatttgtt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A G        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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