The detailed information of tRNA gene sequence


Sequence ID>WENV170687686
Genome IDLFRM01205367
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 135
End posion on genome 51
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctatcgcagt
tRNA gene sequence 
GCCCGGGTGGCGGAATCGGTAGACGCAGGGGATTCAAAATCCCCCGCCGCAAGGTGTGCC
GGTTCGAGTCCGGCCCCGGGTACCA
Downstream region at tRNA end position 
cttatgaggc
Secondary structure (Cloverleaf model)
>WENV170687686	Leu	CAA
                   t      ACCA cttatgaggc
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    C       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCAAGGTGT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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