The detailed information of tRNA gene sequence


Sequence ID>WENV170687699
Genome IDLFRM01206149
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 25013
End posion on genome 25089
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaagttcct
tRNA gene sequence 
GGCGGAATAGCTCAGCTGGCTAGAGCATTCGGTTCATACCCGAAGGGTCGTAGGTTCAAG
TCCTATTTCCGCTACCA
Downstream region at tRNA end position 
cacatgctgg
Secondary structure (Cloverleaf model)
>WENV170687699	Met	CAT
                   t      ACCA cacatgctgg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T A T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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