The detailed information of tRNA gene sequence


Sequence ID>WENV170687712
Genome IDLFRM01207012
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7340
End posion on genome 7414
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgtattttt
tRNA gene sequence 
GGCGAGATAGCTCAGTTGGTTAGAGCGCATGATTCATAATCATGAGGTCCCGGGATCATG
CCCCGGTCTCGCTACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170687712	Met	CAT
                   t      ACnn nnnnnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          C G
                    T     G G C C C     T
      T G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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