The detailed information of tRNA gene sequence


Sequence ID>WENV170687717
Genome IDLFRM01207372
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 348
End posion on genome 423
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cctgtaccgc
tRNA gene sequence 
GCCGCCTTAGCTCAGTCGGTAGAGCATCTCACTCGTAATGAGAAGGTCGCGAGTTCGATT
CTCGCAGGCGGCTCCA
Downstream region at tRNA end position 
cacaacccca
Secondary structure (Cloverleaf model)
>WENV170687717	Thr	CGT
                   c      TCCA cacaacccca
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T T
                    T     C G C T C     A
      T G A        A      | | | | |     G
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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