The detailed information of tRNA gene sequence


Sequence ID>WENV170687731
Genome IDLFRM01208014
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 462
End posion on genome 387
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttaacatcac
tRNA gene sequence 
GCCCTCATAGCTCAGTAGGCAGAGCGCATCCATGGTAAGGATGAGGTCATCAGTTCGATT
CTGATTGAGGGCTCCA
Downstream region at tRNA end position 
tgaaaaacga
Secondary structure (Cloverleaf model)
>WENV170687731	Thr	GGT
                   c      TCCA tgaaaaacga
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T T
                    T     T A G T C     A
      T G A        A      | | | | |     G
    A       C T C G       A T C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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