The detailed information of tRNA gene sequence


Sequence ID>WENV170687743
Genome IDLFRM01208564
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 55438
End posion on genome 55365
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
attgatgtgc
tRNA gene sequence 
GCTCCCATAGTTCAAAGGTAGAACGCAGCAATGGTAATGCTGAAATCCAAGTTCGATTCT
TGGTGGGAGCACCA
Downstream region at tRNA end position 
tttttatcta
Secondary structure (Cloverleaf model)
>WENV170687743	Thr	GGT
                   c      ACCA tttttatcta
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G G T T C     A
        A A        A      | | | | |     G
      A     C T T G       C C A A G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     AAAT
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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