The detailed information of tRNA gene sequence


Sequence ID>WENV170687767
Genome IDLFRM01209920
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 673
End posion on genome 598
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caatgaatat
tRNA gene sequence 
GCACCATTAGCTCAGTCGGTAGAGCACCTGACTCTTAATCAGGGTGTCTAGGGTTCGAAT
CCCTAATGGTGTACCA
Downstream region at tRNA end position 
tagtaatcac
Secondary structure (Cloverleaf model)
>WENV170687767	Lys	CTT
                   t      ACCA tagtaatcac
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     A T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       T A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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