The detailed information of tRNA gene sequence


Sequence ID>WENV170687773
Genome IDLFRM01210132
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 511
End posion on genome 584
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgtgcagcga
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTATCCCCGGTTCAAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
tttttattta
Secondary structure (Cloverleaf model)
>WENV170687773	Cys	GCA
                   a      TCCA tttttattta
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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