The detailed information of tRNA gene sequence


Sequence ID>WENV170687775
Genome IDLFRM01210640
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 658
End posion on genome 734
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agaaacaagt
tRNA gene sequence 
CGGGGCATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGTAGGTTCGAA
TCCTACTGTCCCGACCA
Downstream region at tRNA end position 
tcaattccca
Secondary structure (Cloverleaf model)
>WENV170687775	Pro	TGG
                   t      ACCA tcaattccca
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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