The detailed information of tRNA gene sequence


Sequence ID>WENV170687794
Genome IDLFRM01211792
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 336
End posion on genome 413
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcggtcagta
tRNA gene sequence 
CGGGACGTAGCGCAGTCTGGTTAGCGTACCTGCATGGGGTGCAGGTGGTCGGAGGTTCGA
ATCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
gaaagaacaa
Secondary structure (Cloverleaf model)
>WENV170687794	Pro	GGG
                   a      ACCA gaaagaacaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     G
  T         C G C G       G G A G G     C
  G         | | | +                 T T
  G         G C G T
    T T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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