The detailed information of tRNA gene sequence


Sequence ID>WENV170687802
Genome IDLFRM01212199
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 3629
End posion on genome 3703
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gaaaaaagat
tRNA gene sequence 
TCTTCAGTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGTTGGTTCAAG
TCCAACCTGAAGAGCgg
Downstream region at tRNA end position 
aaacgtgttt
Secondary structure (Cloverleaf model)
>WENV170687802	Asn	GTT
                   t      GCgg aaacgtgttt
                     T - A
                     C - G
                     T - A
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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