The detailed information of tRNA gene sequence


Sequence ID>WENV170687817
Genome IDLFRM01212390
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 889
End posion on genome 814
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
attttcgctc
tRNA gene sequence 
GCCGGCTTAGCTCAACTGGTAGAGCAATTGACTTGTAATCAATAGGTTGCGGGTTCAAGT
CCTGCAGCCGGCACCA
Downstream region at tRNA end position 
gaaaaaagac
Secondary structure (Cloverleaf model)
>WENV170687817	Thr	TGT
                   c      ACCA gaaaaaagac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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