The detailed information of tRNA gene sequence


Sequence ID>WENV170687824
Genome IDLFRM01212390
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 235
End posion on genome 159
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caattcacac
tRNA gene sequence 
CGCGGGGTAGAGCAGCTAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
tacggtccca
Secondary structure (Cloverleaf model)
>WENV170687824	Met	CAT
                   c      ACCA tacggtccca
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    T       C G A G       G T A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK