The detailed information of tRNA gene sequence


Sequence ID>WENV170687830
Genome IDLFRM01212840
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1691
End posion on genome 1618
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gttcaagcgg
tRNA gene sequence 
GCGGGTGTAGCTCAGTGGTAGAGCCCTGGCCTTCCAAGCCAGTCGCGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
ctcagcaaca
Secondary structure (Cloverleaf model)
>WENV170687830	Gly	TCC
                   g      TCCA ctcagcaaca
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        G A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     TCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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