The detailed information of tRNA gene sequence


Sequence ID>WENV170687883
Genome IDLFRM01215129
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 69
End posion on genome 143
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tccagagtgt
tRNA gene sequence 
GGCGCCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATTCCCCAGTTCGAATC
TGGGTGGCGCCTCCA
Downstream region at tRNA end position 
ttttatttcg
Secondary structure (Cloverleaf model)
>WENV170687883	Cys	GCA
                   t      TCCA ttttatttcg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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