The detailed information of tRNA gene sequence


Sequence ID>WENV170687928
Genome IDLFRM01217798
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 55512
End posion on genome 55436
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttttggatag
tRNA gene sequence 
GCGGGAATAGCTCAGTTGGTTAGAGCGTCAGCCTTCCAAGCTGAAGGTCGCGGGTTCGAA
TCCCGTTTCCCGCTCCA
Downstream region at tRNA end position 
ttaatgtggc
Secondary structure (Cloverleaf model)
>WENV170687928	Gly	TCC
                   g      TCCA ttaatgtggc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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