The detailed information of tRNA gene sequence


Sequence ID>WENV170687931
Genome IDLFRM01217956
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13842
End posion on genome 13758
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
agtgctatat
tRNA gene sequence 
GGTGGGGTAGCGAAGTGGCTAAACGCGGCGGACTGTAAATCCGCTCCCTCAGGGTTCGGC
AGTTCGAATCTGTCCCCCACCACCA
Downstream region at tRNA end position 
cttatatggt
Secondary structure (Cloverleaf model)
>WENV170687931	Tyr	GTA
                   t      ACCA cttatatggt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G T C     A
      T G A        A      | + | | |     G
    G       A G C G       G G C A G     C
    G         | | |                 T T
    C       A C G C
      T A A        G     TCCCTCAGGGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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