The detailed information of tRNA gene sequence


Sequence ID>WENV170687951
Genome IDLFRM01218990
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 129
End posion on genome 206
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
caaagcgatt
tRNA gene sequence 
CGGGATGTAGCTCAGTCCGGTTAGAGTACGCGTCTGGGGGGCGTGTGGTCGCTGGTTCGA
ATCCAGTCATCCCGACAA
Downstream region at tRNA end position 
aagcggtaat
Secondary structure (Cloverleaf model)
>WENV170687951	Pro	GGG
                   t      ACAA aagcggtaat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
    C T G A        A      + | | | |     G
  C         C T C G       G C T G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          A     TGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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