The detailed information of tRNA gene sequence


Sequence ID>WENV170687955
Genome IDLFRM01219103
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 300
End posion on genome 225
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cgctccattt
tRNA gene sequence 
GCCCTCATAGCTCAGTAGGCAGAGCGCATCCATGGTAAGGATGAGGTCACCAGTTCGAAT
CTGGTTGGGGGCTCCA
Downstream region at tRNA end position 
aaaagaaaaa
Secondary structure (Cloverleaf model)
>WENV170687955	Thr	GGT
                   t      TCCA aaaagaaaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     T G G T C     A
      T G A        A      | | | | |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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