The detailed information of tRNA gene sequence


Sequence ID>WENV170687957
Genome IDLFRM01219372
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 484
End posion on genome 397
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tttgatatac
tRNA gene sequence 
TGCCCTGTGGAGGAAATGGATAACTCGCCAAACTTTGGATTTGGTGCTTTTATAAAGCTT
GTGGGTTCGAGTCCCACCAGGGTTGCAA
Downstream region at tRNA end position 
attgattatc
Secondary structure (Cloverleaf model)
>WENV170687957	Gln	TTG
                   c      GCAA attgattatc
                     T   T
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C A C C C     A
      A A A        G      | | | | |     G
    T       G G A G       G T G G G     C
    G         | | |                 T T
    G       A C T C
      A T A        G     TGCTTTTATAAAGCTT
                    C - G
                    C - G
                    A - T
                    A - T
                    A - T
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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