The detailed information of tRNA gene sequence


Sequence ID>WENV170687975
Genome IDLFRM01220536
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 6869
End posion on genome 6795
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
atataaattt
tRNA gene sequence 
GCCCATGTGGCTCAGGGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGCGCGTTCGATTC
GCGCCATGGGCACCA
Downstream region at tRNA end position 
catatctcat
Secondary structure (Cloverleaf model)
>WENV170687975	Thr	GGT
                   t      ACCA catatctcat
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     C G C G C     A
        G A        G      | | | | |     G
      G     C T C G       G C G C G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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