The detailed information of tRNA gene sequence


Sequence ID>WENV170687989
Genome IDLFRM01220894
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 25198
End posion on genome 25274
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgctccatga
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCAACGGACTTCTAATCCGTAGGCCAGGGGTTCGAA
TCCCTTCAGGCGCGCCA
Downstream region at tRNA end position 
gatttagtta
Secondary structure (Cloverleaf model)
>WENV170687989	Arg	TCT
                   a      GCCA gatttagtta
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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