The detailed information of tRNA gene sequence


Sequence ID>WENV170688003
Genome IDLFRM01221021
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 21732
End posion on genome 21808
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttagtaacac
tRNA gene sequence 
GCGCTCGTAGCTCAATTGGATAGAGCATCTGACTTCGGATCAGAGGGTTATGGGTTCGAG
TCCTATCGAGCGCGCCA
Downstream region at tRNA end position 
tttttaaagt
Secondary structure (Cloverleaf model)
>WENV170688003	Arg	TCG
                   c      GCCA tttttaaagt
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     T A T C C     A
      T A A        A      | | + | |     G
    T       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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