The detailed information of tRNA gene sequence


Sequence ID>WENV170688024
Genome IDLFRM01222927
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 443
End posion on genome 515
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtccctaca
tRNA gene sequence 
GGGCCCGTAGCATAGCAGGTGGTGCACTCGGCTGATAACCGAGAGGTCATGCGTTCGAAT
CGCATCGGGCCCAtcg
Downstream region at tRNA end position 
ttcttttgtt
Secondary structure (Cloverleaf model)
>WENV170688024	Ile	GAT
                   a      Atcg ttcttttgtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        A      | | | | |     G
    A       T A C G       A T G C G     C
    G       + | | |                 T T
    G       G T G C
      T G          A     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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