The detailed information of tRNA gene sequence


Sequence ID>WENV170688035
Genome IDLFRM01224020
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1205
End posion on genome 1131
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cttgcgcctt
tRNA gene sequence 
GCCCATGTGGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGCGCGTTCGATCC
GCGCCATGGGCACCA
Downstream region at tRNA end position 
atcgaatttt
Secondary structure (Cloverleaf model)
>WENV170688035	Thr	GGT
                   t      ACCA atcgaatttt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          C T
                    T     C G C G C     A
        G A        G      | | | | |     G
      T     C T C G       G C G C G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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