The detailed information of tRNA gene sequence


Sequence ID>WENV170688129
Genome IDLFRM01229271
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1460
End posion on genome 1534
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
accagtgtat
tRNA gene sequence 
GGCCCCTTGGTCAAGAGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
gaataaggaa
Secondary structure (Cloverleaf model)
>WENV170688129	Glu	TTC
                   t      ACCA gaataaggaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      A G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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